PhyNexus's PhyTip Columns
PhyNexus's PhyTip Columns

PhyTip Immobilized Trypsin Columns

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Sample Processing on the PhyNexus MEA2 Personal Purification System

Part I. Trypsin PhyTip digestion.

  1. 10 μL samples were placed in dark 96-well plate in Position 4. Plate was covered with foil sticker.
  2. Denaturing: Pick up 20 μL 8M Guanidine-HCl and add into sample wells.
  3. Reduction: Pick up 5 μL DTT and add into sample wells, react for 30 min at RT.
  4. Alkylation: Pick up 5 μL IAA and add into sample wells, react for 20 min at RT.
  5. Dilution: Pick up 60 μL 50 mM Ammonium Bicarbonate from Channel C at position 8 and add into sample wells. Final sample volume is 100 μL.
  6. Trypsin tip equilibration: Pick up trypsin tips at position 1, equilibrate tips in Channel D at position 8.
  7. Trypsin digestion: Move trypsin tips into sample well and perform on-column digestion at RT.
  8. pH adjustment: Pick up 7μL 5% TFA to acidify samples for desalting.

Part II. C18 PhyTip desalting.

  1. Buffer preparation: Pick up 100 μL 0.1% TFA and dispense into 96-well plate at position 5. Then pick up 100 μL elution buffer and dispense into 96-well plate at position 7.
  2. C18 tip activation: Pick up C18 tips at position 2, activate tips in Channel F at position 8.
  3. C18 tip equilibration:Move C18 tips into Channel G at position 8, equilibrate tips in 0.1% TFA.
  4. Peptide binding: move C18 tips into sample wells, perform peptide binding procedure.
  5. C18 tip washing: move C18 tips into wash plate at position 5, wash tips in 0.1% TFA.
  6. Peptide elution: move C18 tips into elution plate at position 7, elute peptides in 60% ACN, 0.1% TFA.